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Disclaimer

The data is gathered from public sources and omnomicsQ customers that have consented to share their quality control (QC) data. These quality control values are from clinical and research experiments.

Since the sequencing type and the quality of input material affects the QC values the number shown here might not reflect the true performance of these sequencers.

Sequencing platforms to compare


HiSeq 2000 vs NextSeq 500 (average sample statistics)

Measure (per sample)HiSeq 2000 NextSeq 500
Reads total67662711
45554768
Bases total8383231587.3
4432537050.3
Bases above Q30 (%)91.8
89.2
Bases above Q20 (%)96.6
93.2
Base quality (average)35.6
33.4
N content (%).0706
.0281
Read length (median)101
111
Read length (minimum)96
51
Read length (maximum)129
115
Distinct reads (%)71.8
42.7